Hey kiteboarder.
Maybe it isn't the water but being out in the sun for a long period of time and the water intensifies the sun. Could this be? I'll tell you why I think it may be.
For years I made hay in the fields and was out in the sun for many hours. About 5 years ago, I noticed the same thing you are describing but it wasn't as intense as yours. The next week I was out again for many hours and it was worse. Each subsequent exposure it got worse, and the next year was even worse yet.
I have moved and don't farm anymore but whenever I am out working on the pool or the yard in the direct sun for hours, I get it. It is always on the base of my fingers/thumbs and sometimes just a few are on my wrists and up my arms.
With all the crap we have put in our environment I wouldn't be surprised if it is a chemical reaction intensified by the sun, maybe the sun itself being that the atmosphere is so wacked.
Did the doctor say what it was or what caused it with any certainty? I heard a news story of an international health org warning of a "global itching" epidemic coming on. Someone knows something eh?
Maybe try some powerful sunblock or an industrial type chemical block skin lotion they make for workers that contact mild chemicals with bare skin. I used to have some but never thought of trying it til now.
Good luck and don't give up going airborn on the kiteboard.