I will give you my opinion for what it's worth. I have not had to worry about STD's for a long time because I settled down. But it my wilder days I was very promiscuous and caught an STD 3 times. All was the result of unprotected sex. One of them I still have because theres no cure; herpes.
The only way to truly know is to be tested, but it sounds to me you have an unrelated virus or have worried yourself into being sick.
When the HIV epedimic was first discovered, I just knew I had it due to all the unprotected sex I had. I made myself sick worrying, diarrhea and everything. I had convinced myself that I had it and was very sick. Well, I got up enough nerve to be tested, and it was negative.